Journal Articles
141Shinyeong Ju, Yumi Kwon, Jeong-Mok Kim, Daechan Park, Seonjeong Lee, Jin-Won Lee, Cheol-Sang Hwang, Cheolju Lee (2020 Apr 21) iNrich, Rapid and Robust Method to Enrich N-Terminal Proteome in a Highly Multiplexed Platform. Anal Chem. doi: 10.1021/acs.analchem.9b05653. [PMID:32267142]
140Ki-Cheol Han, Daechan Park, Shinyeong Ju, Young Eun Lee, Sun-Hee Heo, Young-Ae Kim, Ji Eun Lee, Yuna Lee, Kyong Hwa Park, Se-Ho Park, Hee Jin Lee, Cheolju Lee*, Mihue Jang* (2020 Apr 3) Streamlined selection of cancer antigens for vaccine development through integrative multi-omics and high-content cell imaging. Sci Rep 10 (1): 5885. doi: 10.1038/s41598-020-62244-z. (*Corresponding authors) [PMID:32245999]
139Seungbum Choi, Yae Eun Park, Eun Jeong Cheon, Kyeong Yeon Kim, Miso Kim, Soo Jin Ann, Hye Min Noh, Jaeho Lee, Chan Joo Lee, Seung Taek Lee, Cheolju Lee, Ji Eun Lee, Sang Hak Lee (2020 Mar) Novel Associations between Related Proteins and Cellular Effects of High-Density Lipoprotein. Korean Circ J 50 (3): 236-247. doi: 10.4070/kcj.2019.0195. [PMID:31845554]
138Seunghyuk Choi#, Shinyeong Ju#, Jinwon Lee, Seungjin Na, Cheolju Lee*, Eunok Paek* (2020 Jan 3) Proteogenomic Approach to UTR Peptide Identification. J Proteome Res 19 (1): 212-220. doi: 10.1021/acs.jproteome.9b00498. (#Equal contribution, *Co-correspondence) [PMID:31714086]
137Suji Han, Hyemi Shin, Jin-Ku Lee, Zhaoqi Liu, Raul Rabadan, Jeongwu Lee, Jihye Shin, Cheolju Lee, Heekyoung Yang, Donggeon Kim, Sung Heon Kim, Jooyeon Kim, Jeong-Woo Oh, Doo-Sik Kong, Jung-Il Lee, Ho Jun Seol, Jung Won Choi, Hyun Ju Kang, Do-Hyun Nam (2019 Dec 6) Secretome analysis of patient-derived GBM tumor spheres identifies midkine as a potent therapeutic target. Exp Mol Med 51 (12): 147. doi: 10.1038/s12276-019-0351-y. [PMID:31811117]
136Prashant Kaushal, Yumi Kwon, Shinyeong Ju, Cheolju Lee (2019 Nov 18) An SDS-PAGE based proteomic approach for N-terminome profiling. Analyst 144 (23): 7001-7009. doi: 10.1039/c9an01616c. [PMID:31647066]
135Wonbeak Yoo, Jaemin Lee, Kyung Hee Noh, Sangmin Lee, Dana Jung, Mohammad Humayun Kabir, Dongmin Park, Cheolju Lee, Ki-Sun Kwon, Ji-Su Kim, Seokho Kim (2019 Oct 7) Progranulin attenuates liver fibrosis by downregulating the inflammatory response. Cell Death Dis 10 (10): 758. doi: 10.1038/s41419-019-1994-2. [PMID:31591383]
134Jihye Shin#, Yumi Kwon#, Seonjeong Lee#, Seungjin Na#, Eun Young Hong, Shinyeong Ju, Hyun-Gyo Jung, Prashant Kaushal, Sungho Shin, Ji Hyun Back, Seon Young Choi, Eun Hee Kim, Su Jin Lee, Yae Eun Park, Hee-Sung Ahn, Younghee Ahn, Mohammad Humayun Kabir, Seong-Jun Park, Won Suk Yang, Jeonghun Yeom, Oh Young Bang, Chul-Won Ha, Jin-Won Lee, Un-Beom Kang, Hye-Jung Kim, Kang-Sik Park, J Eugene Lee, Ji Eun Lee, Jin Young Kim, Kwang Pyo Kim, Youngsoo Kim, Hisashi Hirano, Eugene C Yi, Je-Yoel Cho, Eunok Paek, Cheolju Lee (2019 Oct 4) Common Repository of FBS Proteins (cRFP) To Be Added to a Search Database for Mass Spectrometric Analysis of Cell Secretome. J Proteome Res 18 (10): 3800-3806. doi: 10.1021/acs.jproteome.9b00475. (#Equal contribution) [PMID:31475827]
133Youngjin Lee, Byoung Sik Kim, Sanghyeon Choi, Eun-Young Lee, Shinhye Park, Jungwon Hwang, Yumi Kwon, Jaekyung Hyun, Cheolju Lee, Jihyun F Kim, Soo Hyun Eom, Myung Hee Kim (2019 Sep 3) Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity. Proc Natl Acad Sci U S A 116 (36): 18031-18040. doi: 10.1073/pnas.1905095116. [PMID:31427506]
132Jihye Shin, Jiheon Rhim, Yumi Kwon, Sun Young Choi, Sungho Shin, Chul-Won Ha, Cheolju Lee (2019 Feb 28) Comparative analysis of differentially secreted proteins in serum-free and serum-containing media by using BONCAT and pulsed SILAC. Sci Rep 9 (1): 3096. doi: 10.1038/s41598-019-39650-z. [PMID:30816242]
131Sujin Hyung, Sun-Kyoung Im, Bo Yoon Lee, Jihye Shin, Jong-Chul Park, Cheolju Lee, Jun-Kyo Francis Suh, Eun-Mi Hur (2019 Feb) Dedifferentiated Schwann cells secrete progranulin that enhances the survival and axon growth of motor neurons. Glia 67 (2): 360-375. doi: 10.1002/glia.23547. [PMID:30444070]
130Jae-Seok Yu, Seong Cheol Hong, Sangwook Wu, Hyun-Mi Kim, Cheolju Lee, Jun-Seok Lee, Ji Eun Lee, Ki-Bum Kim (2019 Jan 31) Differentiation of selectively labeled peptides using solid-state nanopores. Nanoscale 11 (5): 2510-2520. doi: 10.1039/c8nr09315f. [PMID:30672547]
129Hee-Sung Ahn, Tae Sung Sohn, Mi Jeong Kim, Byoung Kyu Cho, Su Mi Kim, Seung Tae Kim, Eugene C Yi, Cheolju Lee (2018 Nov 15) SEPROGADIC - serum protein-based gastric cancer prediction model for prognosis and selection of proper adjuvant therapy. Sci Rep 8 (1): 16892. doi: 10.1038/s41598-018-34858-x. [PMID:30442939]
128Jeong-Mok Kim, Ok-Hee Seok, Shinyeong Ju, Ji-Eun Heo, Jeonghun Yeom, Da-Som Kim, Joo-Yeon Yoo, Alexander Varshavsky, Cheolju Lee*, Cheol-Sang Hwang* (2018 Nov 30) Formyl-methionine as an N-degron of a eukaryotic N-end rule pathway. Science 362 (6418): pii: eaat0174. doi: 10.1126/science.aat0174. (*Co-corresponding authors) [PMID:30409808]
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127Hee-Sung Ahn, Seong-Jun Park, Hyun-Gyo Jung, Se Joon Woo, Cheolju Lee (2018 Dec) Quantification of protein markers monitoring the pre-analytical effect of blood storage time before plasma isolation using (15) N metabolically labeled recombinant proteins. J Mass Spectrom 53 (12): 1189-1197. doi: 10.1002/jms.4294. [PMID:30251292]
126Boyoung Lee, Eunyoung Bang, Won Suk Yang, Afshin Paydar, Go Eun Ha, Sujin Kim, Jong-Hyun Kim, Taesup Cho, Seung Eun Lee, Sukchan Lee, Myoung-Goo Kang, Eunji Cheong, Key-Sun Kim, Cheolju Lee, Myeong-Hee Yu, Hee-Sup Shin (2018 Sep 13) The Possible Role of Neurobeachin in Extinction of Contextual Fear Memory. Sci Rep 8 (1): 13752. doi: 10.1038/s41598-018-30589-1. [PMID:30213954]
125Jinho Seo, Eun-Woo Lee, Jihye Shin, Daehyeon Seong, Young Woo Nam, Manhyung Jeong, Seon-Hyeong Lee, Cheolju Lee, Jaewhan Song (2018 Sep) K6 linked polyubiquitylation of FADD by CHIP prevents death inducing signaling complex formation suppressing cell death. Oncogene 37 (36): 4994-5006. doi: 10.1038/s41388-018-0323-z. [PMID:29795330]
124Jun Won Park, Il Yong Kim, Ji Won Choi, Hee Jung Lim, Jae Hoon Shin, Yo Na Kim, Seo Hyun Lee, Yeri Son, Mira Sohn, Jong Kyu Woo, Joseph H Jeong, Cheolju Lee, Yun Soo Bae, Je Kyung Seong (2018 Aug) AHNAK Loss in Mice Promotes Type II Pneumocyte Hyperplasia and Lung Tumor Development. Mol Cancer Res 16 (8): 1287-1298. doi: 10.1158/1541-7786.MCR-17-0726. [PMID:29724814]
123Yumi Kwon, Shinyeong Ju, Prashant Kaushal, Jin-Won Lee, Cheolju Lee (2018 Mar 6) Neutralizing the Detrimental Effect of an N-Hydroxysuccinimide Quenching Reagent on Phosphopeptide in Quantitative Proteomics. Anal Chem 90 (5): 3019-3023. doi: 10.1021/acs.analchem.7b04678. [PMID:29406695]
122Sungsu Lim, Dohee Kim, Shinyeong Ju, Seulgi Shin, Il-Joo Cho, Sung-Hye Park, Regis Grailhe, Cheolju Lee*, Yun Kyung Kim* (2018 Apr 6) Glioblastoma-secreted soluble CD44 activates tau pathology in the brain. Exp Mol Med 50 (4): 5. doi: 10.1038/s12276-017-0008-7. (*Co-correspondence) [PMID:29622771]
121Yae Eun Park, Jeonghun Yeom, YoungSoo Kim, Hye Jin Lee, Ki-Cheol Han, Seung-Taek Lee, Cheolju Lee, Ji Eun Lee (2018 Jan) Identification of Plasma Membrane Glycoproteins Specific to Human Glioblastoma Multiforme Cells Using Lectin Arrays and LC-MS/MS. Proteomics 18 (1). doi: 10.1002/pmic.201700302. [PMID:29136334]
120Sungdae Kim, Minyeop Nahm, Najin Kim, Yumi Kwon, Joohyung Kim, Sukwoo Choi, Eun Young Choi, Jiwon Shim, Cheolju Lee, Seungbok Lee (2017 Nov 15) Graf regulates hematopoiesis through GEEC endocytosis of EGFR. Development 144 (22): 4159-4172. doi: 10.1242/dev.153288. [PMID:28993397]
119Jihye Shin#, Sang-Yun Song#, Hee-Sung Ahn#, Byung Chull An, Yoo-Duk Choi, Eun Gyeong Yang, Kook-Joo Na, Seung-Taek Lee, Jae-Il Park, Seon-Young Kim, Cheolju Lee*, Seung-Won Lee* (2017 Aug 24) Integrative analysis for the discovery of lung cancer serological markers and validation by MRM-MS. PLoS One 12 (8): e0183896. doi: 10.1371/journal.pone.0183896. (*Co-correspondence, #Equal contribution) [PMID:28837649]
118Jeonghun Yeom, Shinyeong Ju, YunJin Choi, Eunok Paek, Cheolju Lee (2017 Jul 26) Comprehensive analysis of human protein N-termini enables assessment of various protein forms. Sci Rep 7 (1): 6599. doi: 10.1038/s41598-017-06314-9. [PMID:28747677]
117Sohee Jeon, Ho-Sun Lee, Ga-Young Lee, Gyeongsin Park, Tae-Min Kim, Jihye Shin, Cheolju Lee, Il-Hoan Oh (2017 Jul 31) Shift of EMT gradient in 3D spheroid MSCs for activation of mesenchymal niche function. Sci Rep 7 (1): 6859. doi: 10.1038/s41598-017-07049-3. [PMID:28761088]
116Joori Park, Yeonkyoung Park, Incheol Ryu, Mi-Hyun Choi, Hyo Jin Lee, Nara Oh, Kyutae Kim, Kyoung Mi Kim, Junho Choe, Cheolju Lee, Ja-Hyun Baik, Yoon Ki Kim (2017 Jun 07) Misfolded polypeptides are selectively recognized and transported toward aggresomes by a CED complex. Nat Commun 8: 15730. doi: 10.1038/ncomms15730. [PMID:28589942]
115Dong Huey Cheon, Eun Gyeong Yang, Cheolju Lee, Ji Eun Lee (2017) Low-Molecular-Weight Plasma Proteome Analysis Using Top-Down Mass Spectrometry. Methods Mol Biol 1619: 103-117. doi: 10.1007/978-1-4939-7057-5_8. [PMID:28674880]
114Kyeong Won Lee, Hyung-Soon Yim, Jihye Shin, Cheolju Lee, Jung-Hyun Lee, Jae-Yeon Jeong (2017 Jan) FGF11 induced by hypoxia interacts with HIF-1alpha and enhances its stability. FEBS Lett 591 (2): 348-357. doi: 10.1002/1873-3468.12547. [PMID:28027390]
113Joon Hee Kang, Seon-Hyeong Lee, Dongwan Hong, Jae-Seon Lee, Hee-Sung Ahn, Ju-Hyun Ahn, Tae Wha Seong, Chang-Hun Lee, Hyonchol Jang, Kyeong Man Hong, Cheolju Lee, Jae-Ho Lee, Soo-Youl Kim (2016 Nov 25) Aldehyde dehydrogenase is used by cancer cells for energy metabolism. Exp Mol Med 48 (11): e272. doi: 10.1038/emm.2016.103. [PMID:27885254]
112Jeonghun Yeom, Mohammad Humayun Kabir, Byungho Lim, Hee-Sung Ahn, Seon-Young Kim, Cheolju Lee (2016 Oct 13) A proteogenomic approach for protein-level evidence of genomic variants in cancer cells. Sci Rep 6: 35305. doi: 10.1038/srep35305. [PMID:27734975]
111Sella Kim, Ji-Hye Lee, Jong Hyeon Seok, Yi-Ho Park, Sang Won Jung, Art E Cho, Cheolju Lee, Mi Sook Chung, Kyung Hyun Kim (2016 Dec 04) Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria. J Mol Biol 428 (24 Pt B): 5007-5018. doi: 10.1016/j.jmb.2016.10.022. [PMID:27777002]
110Eun-Young Lee, Hyun-Cheol Lee, Hyun-Kwan Kim, Song Yee Jang, Seong-Jun Park, Yong-Hoon Kim, Jong Hwan Kim, Jungwon Hwang, Jae-Hoon Kim, Tae-Hwan Kim, Abul Arif, Seon-Young Kim, Young-Ki Choi, Cheolju Lee, Chul-Ho Lee, Jae U Jung, Paul L Fox, Sunghoon Kim, Jong-Soo Lee, Myung Hee Kim (2016 Nov) Infection-specific phosphorylation of glutamyl-prolyl tRNA synthetase induces antiviral immunity. Nat Immunol 17 (11): 1252-1262. doi: 10.1038/ni.3542. [PMID:27595231]
109Joon Hee Kang, Seon-Hyeong Lee, Jae-Seon Lee, Boas Nam, Tae Wha Seong, Jaekyoung Son, Hyonchol Jang, Kyeong Man Hong, Cheolju Lee, Soo-Youl Kim (2016 Aug 02) Aldehyde dehydrogenase inhibition combined with phenformin treatment reversed NSCLC through ATP depletion. Oncotarget 7 (31): 49397-49410. doi: 10.18632/oncotarget.10354. [PMID:27384481]
108Hye-Jung Kim, Seong Joon Ahn, Se Joon Woo, Hye Kyoung Hong, Eui Jin Suh, Jeeyun Ahn, Ji Hyun Park, Na-Kyung Ryoo, Ji Eun Lee, Ki Woong Kim, Kyu Hyung Park, Cheolju Lee (2016 Sep 08) Proteomics-based identification and validation of novel plasma biomarkers phospholipid transfer protein and mannan-binding lectin serine protease-1 in age-related macular degeneration. Sci Rep 6: 32548. doi: 10.1038/srep32548. [PMID:27605007]
107Jihye Shin, Gamin Kim, Jong Won Lee, Ji Eun Lee, Yoo Seok Kim, Jong-Han Yu, Seung-Taek Lee, Sei Hyun Ahn, Hoguen Kim, Cheolju Lee (2016 Jun) Identification of ganglioside GM2 activator playing a role in cancer cell migration through proteomic analysis of breast cancer secretomes. Cancer Sci 107 (6): 828-835. doi: 10.1111/cas.12935. [PMID:27002480]
106Jinho Seo, Eun-Woo Lee, Hyerim Sung, Daehyeon Seong, Yves Dondelinger, Jihye Shin, Manhyung Jeong, Hae-Kyung Lee, Jung-Hoon Kim, Su Yeon Han, Cheolju Lee, Je Kyung Seong, Peter Vandenabeele, Jaewhan Song (2016 Mar) CHIP controls necroptosis through ubiquitylation- and lysosome-dependent degradation of RIPK3. Nat Cell Biol 18 (3): 291-302. doi: 10.1038/ncb3314. [PMID:26900751]
105Dong-Joo You, Sunam Mander, Cho Rong Park, Okjae Koo, Cheolju Lee, Seong-Hyun Oh, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2016 Jun) NME1L Negatively Regulates IGF1-Dependent Proliferation of Breast Cancer Cells. J Cell Biochem 117 (6): 1454-1463. doi: 10.1002/jcb.25441. [PMID:26565392]
104Dong Huey Cheon, Eun Ji Nam, Kyu Hyung Park, Se Joon Woo, Hye Jin Lee, Hee Cheol Kim, Eun Gyeong Yang, Cheolju Lee, Ji Eun Lee (2016 Jan 4) Comprehensive Analysis of Low-Molecular-Weight Human Plasma Proteome Using Top-Down Mass Spectrometry. J Proteome Res 15 (1): 229-244. doi: 10.1021/acs.jproteome.5b00773. [PMID:26576621]
103Miju Kim, Minchul Kim, Seong-Jun Park, Cheolju Lee, Dae-Sik Lim (2016 Jan) Role of Angiomotin-like 2 mono-ubiquitination on YAP inhibition. EMBO Rep 17 (1): 64-78. doi: 10.15252/embr.201540809. [PMID:26598551]
102Seong-Jun Park*, Hee-Sung Ahn*, Jun Seok Kim, Cheolju Lee (2015 Nov 6) Evaluation of Multi-tRNA Synthetase Complex by Multiple Reaction Monitoring Mass Spectrometry Coupled with Size Exclusion Chromatography. PLoS One 10 (11): e0142253. doi: 10.1371/journal.pone.0142253. (*Equal contribution) [PMID:26544075]
101Han-Byoel Lee, Un-Beom Kang, Hyeong-Gon Moon, Jiwoo Lee, Kyung-Min Lee, Minju Yi, Yong Sun Park, Jong Won Lee, Jong-Han Yu, Seung Ho Choi, Sang Heon Cho, Cheolju Lee, Wonshik Han, Dong-Young Noh (2015 Nov) Development and Validation of a Novel Plasma Protein Signature for Breast Cancer Diagnosis by Using Multiple Reaction Monitoring-based Mass Spectrometry. Anticancer Res 35 (11): 6271-6279. [PMID:26504062]
100Min-Sik Lee, Man-Hyung Jeong, Hyun-Woo Lee, Hyun-Ji Han, Aram Ko, Stephen M Hewitt, Jae-Hoon Kim, Kyung-Hee Chun, Joon-Yong Chung, Cheolju Lee, Hanbyoul Cho, Jaewhan Song (2015 Jul 17) PI3K/AKT activation induces PTEN ubiquitination and destabilization accelerating tumourigenesis. Nat Commun 6: 7769. doi: 10.1038/ncomms8769. [PMID:26183061]
99Dong-Joo You, Cho Rong Park, Michael Furlong, Okjae Koo, Cheolju Lee, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2015 Nov) Dimer of arfaptin 2 regulates NF-kappaB signaling by interacting with IKKbeta/NEMO and inhibiting IKKbeta kinase activity. Cell Signal 27 (11): 2173-2181. doi: 10.1016/j.cellsig.2015.08.012. [PMID:26296658]
98Jang-Won Ahn, Sunjik Kim, Wooju Na, Su-Jin Baek, Jeong-Hwan Kim, Keehong Min, Jeonghun Yeom, Hoyun Kwak, Sunjoo Jeong, Cheolju Lee, Seon-Young Kim, Cheol Yong Choi (2015 Jul 27) SERBP1 affects homologous recombination-mediated DNA repair by regulation of CtIP translation during S phase. Nucleic Acids Res 43 (13): 6321-6333. doi: 10.1093/nar/gkv592. [PMID:26068472]
97Jihye Shin, Gamin Kim, Mohammad Humayun Kabir, Seong Jun Park, Seoung Taek Lee, Cheolju Lee (2015 Mar 30) Use of Composite Protein Database including Search Result Sequences for Mass Spectrometric Analysis of Cell Secretome. PLoS One 10 (3): e0121692. doi: 10.1371/journal.pone.0121692. [PMID:25822838]
96Jeonghun Yeom, Min Jung Kang, Dongyun Shin, Hyun Kyu Song, Cheolju Lee*, Ji Eun Lee* (2015 Mar 10) mTRAQ-based quantitative analysis combined with peptide fractionation based on cysteinyl peptide enrichment. Anal Biochem 477: 41-49. doi: 10.1016/j.ab.2015.03.005. (*Corresponding authors) [PMID:25766576]
95Seong-Jun Park, Joohee Mun, Won Suk Yang, Mohammad Humayun Kabir, Jeonghun Yeom, Jihye Shin, Hee-Sung Ahn, Shinyeong Joo, Yu Mi Kwon, Mijeong Kim, Dong Huey Cheon, Su-Min Lee, Yae Eun Park, Kyeong Yeon Kim, Ji Eun Lee, Eun Gyeong Yang, Myeong-Hee Yu, Dong-Young Noh, Cheolju Lee (2015 Mar) Comparative profiling of breast cancer tissue membrane proteome by use of SDS-PAGE based cICAT method. Bio Design 3 (1): 48-54.
94Jeonghun Yeom*, Mohammad Humayun Kabir*, Cheolju Lee (2015 Jan 15) Impact of data-dependent exclusion list based mass spectrometry on label-free proteomic quantification. Rapid Commun Mass Spectrom 29 (1): 128-134. doi: 10.1002/rcm.7081. (*Equal contribution) [PMID:25462373]
93Meiying Song, Hyunki Kim, Won Kyu Kim, Sung Pil Hong, Cheolju Lee, Hoguen Kim (2014 Dec) High expression of AT-rich interactive domain 3A (ARID3A) is associated with good prognosis in colorectal carcinoma. Ann Surg Oncol 21 Suppl 4: S481-489. doi: 10.1245/s10434-013-3435-2. [PMID:24366420]
92Jihye Shin, Hye-Jung Kim, Gamin Kim, Meiying Song, Se Joon Woo, Seung-Taek Lee, Hoguen Kim, Cheolju Lee (2014 Nov 7) Discovery of melanotransferrin as a serological marker of colorectal cancer by secretome analysis and quantitative proteomics. J Proteome Res 13 (11): 4919-4931. doi: 10.1021/pr500790f. [PMID:25216327]
91Hye-Jung Kim*, Se Joon Woo*#, Eui Jin Suh, Jeeyun Ahn, Ji Hyun Park, Hye Kyoung Hong, Ji Eun Lee, Seong Joon Ahn, Duck Jin Hwang, Ki Woong Kim, Kyu Hyung Park#, Cheolju Lee# (2014 Oct 8) Identification of vinculin as a potential plasma marker for age-related macular degeneration. Invest Ophthalmol Vis Sci 55 (11): 7166-7176. doi: 10.1167/iovs.14-15168. (*Co-first authors; #Co-coresponding authors) [PMID:25298412]
90Ara B Hwang, Eun-A Ryu, Murat Artan, Hsin-Wen Chang, Mohammad Humayun Kabir, Hyun-Jun Nam, Dongyeop Lee, Jae-Seong Yang, Sanguk Kim, William B Mair, Cheolju Lee, Siu Sylvia Lee, Seung-Jae Lee (2014 Oct 21) Feedback regulation via AMPK and HIF-1 mediates ROS-dependent longevity in Caenorhabditis elegans. Proc Natl Acad Sci U S A 111 (42): E4458-4467. doi: 10.1073/pnas.1411199111. [PMID:25288734]
89Jun Seok Kim, Hee-Sung Ahn, Soo Min Cho, Ji Eun Lee, YoungSoo Kim, Cheolju Lee (2014 Aug 20) Detection and quantification of plasma amyloid-beta by selected reaction monitoring mass spectrometry. Anal Chim Acta 840: 1-9. doi: 10.1016/j.aca.2014.06.024. (Selected as a 'Featured Article') [PMID:25086887]
88Dong-Joo You, Cho Rong Park, Hyun Bok Lee, Mi Jin Moon, Ju-Hee Kang, Cheolju Lee, Seong-Hyun Oh, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2014 Jun 20) A splicing variant of NME1 negatively regulates NF-kappaB signaling and inhibits cancer metastasis by interacting with IKKbeta. J Biol Chem 289 (25): 17709-17720. doi: 10.1074/jbc.M114.553552. [PMID:24811176]
87Jungwon Hwang, Hyun-Woo Suh, Young Ho Jeon, Eunha Hwang, Loi T Nguyen, Jeonghun Yeom, Seung-Goo Lee, Cheolju Lee, Kyung Jin Kim, Beom Sik Kang, Jin-Ok Jeong, Tae-Kwang Oh, Inpyo Choi, Jie-Oh Lee, Myung Hee Kim (2014) The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein. Nat Commun 5: 2958. doi: 10.1038/ncomms3958. [PMID:24389582]
86Sun-Ho Han*, Jun Seok Kim*, Youngju Lee, Heesun Choi, Jong-Won Kim, Duk Lyul Na, Eun Gyeong Yang, Myeong-Hee Yu, Daehee Hwang, Cheolju Lee#, Inhee Mook-Jung# (2014 Feb) Both targeted mass spectrometry and flow sorting analysis methods detected the decreased serum apolipoprotein e level in Alzheimer's disease patients. Mol Cell Proteomics 13 (2): 407-419. doi: 10.1074/mcp.M113.028639. (*Co-first authors; #Co-coresponding authors) [PMID:24319058]
85Jacob J Kennedy, Susan E Abbatiello, Kyunggon Kim, Ping Yan, Jeffrey R Whiteaker, Chenwei Lin, Jun Seok Kim, Yuzheng Zhang, Xianlong Wang, Richard G Ivey, Lei Zhao, Hophil Min, Youngju Lee, Myeong-Hee Yu, Eun Gyeong Yang, Cheolju Lee, Pei Wang, Henry Rodriguez, Youngsoo Kim, Steven A Carr, Amanda G Paulovich (2014 Feb) Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins. Nat Methods 11 (2): 149-155. doi: 10.1038/nmeth.2763. [PMID:24317253]
84Chae Young Hwang*, Kyutae Kim*, Jeong Yi Choi, Young Jae Bahn, Seung-Min Lee, Yoon Ki Kim, Cheolju Lee#, Ki-Sun Kwon# (2014 Jan) Quantitative proteome analysis of age-related changes in mouse gastrocnemius muscle using mTRAQ. Proteomics 14 (1): 121-132. doi: 10.1002/pmic.201200497. (*Co-first authors; #Co-coresponding authors) [PMID:24243720]
83Dae Gyu Kim, Jin Young Lee, Nam Hoon Kwon, Pengfei Fang, Qian Zhang, Jing Wang, Nicolas L Young, Min Guo, Hye Young Cho, Ameeq Ul Mushtaq, Young Ho Jeon, Jin Woo Choi, Jung Min Han, Ho Woong Kang, Jae Eun Joo, Youn Hur, Wonyoung Kang, Heekyoung Yang, Do-Hyun Nam, Mi-Sook Lee, Jung Weon Lee, Eun-Sook Kim, Aree Moon, Kibom Kim, Doyeun Kim, Eun Joo Kang, Youngji Moon, Kyung Hee Rhee, Byung Woo Han, Jee Sun Yang, Gyoonhee Han, Won Suk Yang, Cheolju Lee, Ming-Wei Wang, Sunghoon Kim (2014 Jan) Chemical inhibition of prometastatic lysyl-tRNA synthetase-laminin receptor interaction. Nat Chem Biol 10 (1): 29-34. doi: 10.1038/nchembio.1381. [PMID:24212136]
82Jung-Mo Ahn, Hye-Jin Sung, Yeon-Hee Yoon, Byung-Gyu Kim, Won Suk Yang, Cheolju Lee, Hae-Min Park, Bum-Jin Kim, Byung-Gee Kim, Soo-Youn Lee, Hyun-Joo An, Je-Yoel Cho (2014 Jan) Integrated glycoproteomics demonstrates fucosylated serum paraoxonase 1 alterations in small cell lung cancer. Mol Cell Proteomics 13 (1): 30-48. doi: 10.1074/mcp.M113.028621. [PMID:24085812]
81Kyutae Kim*, Seong-Jun Park*, Seungjin Na, Jun Seok Kim, Hyungwon Choi, Yoon Ki Kim, Eunok Paek, Cheolju Lee (2013) Reinvestigation of Aminoacyl-TRNA Synthetase Core Complex by Affinity Purification-Mass Spectrometry Reveals TARSL2 as a Potential Member of the Complex. PLoS One 8 (12): e81734. (*Equal contribution)
80Dong Min Cha, Se Joon Woo, Hye-Jung Kim, Cheolju Lee, Kyu Hyung Park (2013) Comparative analysis of aqueous humor cytokine levels between patients with exudative age-related macular degeneration and normal controls. Invest. Ophthalmol. Vis. Sci. 54 (10): 7038-7044.
79Dong Wook Choi, Wooju Na, Mohammad Humayun Kabir, Eunbi Yi, Seonjeong Kwon, Jeonghun Yeom, Jang-Won Ahn, Hee-Hyun Choi, Youngha Lee, Kyoung Wan Seo, Min Kyoo Shin, Se-Ho Park, Hae Yong Yoo, Kyo-Ichi Isono, Haruhiko Koseki, Seong-Tae Kim, Cheolju Lee, Yunhee Kim Kwon, Cheol Yong Choi (2013) WIP1, a Homeostatic Regulator of the DNA Damage Response, Is Targeted by HIPK2 for Phosphorylation and Degradation. Molecular Cell 51 (3): 374-385.
78Jun Seok Kim, Youngju Lee, Min Young Lee, Jihye Shin, Jung Min Han, Eun Gyeong Yang, Myeong-Hee Yu, Sunghoon Kim, Daehee Hwang, Cheolju Lee (2013) Multiple reaction monitoring of multiple low-abundance transcription factors in whole lung cancer cell lysates. J. Proteome Res. 12 (6): 2582-2596.
77Eunhee Kim, Misuk Kim, Dong-Hun Woo, Yongjae Shin, Jihye Shin, Nakho Chang, Young Taek Oh, Hong Kim, Jingeun Rheey, Ichiro Nakano, Cheolju Lee, Kyeung Min Joo, Jeremy N. Rich, Do-Hyun Nam, Jeongwu Lee (2013) Phosphorylation of EZH2 activates STAT3 signaling via STAT3 methylation and promotes tumorigenicity of glioblastoma stem-like cells. Cancer Cell 23 (6): 839-852.
76Cho Rong Park, Dong-Joo You, Dong-Kyu Kim, Mi Jin Moon, Cheolju Lee, Seung-Hyun Oh, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2013) CXCL14 enhances proliferation and migration of NCI-H460 human lung cancer cells overexpressing the glycoproteins containing heparan sulfate or sialic acid. J. Cell. Biochem. 114 (5): 1084-1096.
75Yong-Hak Kim, Woo-Seok Song, Hayoung Go, Chang-Jun Cha, Cheolju Lee, Myeong-Hee Yu, Peter C. K. Lau, Kangseok Lee (2013) 2-nitrobenzoate 2-nitroreductase (NbaA) switches its substrate specificity from 2-nitrobenzoic acid to 2,4-dinitrobenzoic acid under oxidizing conditions. J. Bacteriol. 195 (2): 180-192.
74So Yeon Kim, Myong Jin Lee, Jeong Won Kim, Yu-Ran Na, Ho-Youl Lee, Hyunju Cho, Keun Byeol Lee, You Mie Lee, Cheolju Lee, Hyunsung Park, Eun Gyeong Yang (2012) Effects of clioquinol analogues on the hypoxia-inducible factor pathway and intracelullar mobilization of metal ions. Biol. Pharm. Bull. 35 (12): 2160-2169.
73Un-Beom Kang, Jeonghun Yeom, Hye-Jung Kim, Hoguen Kim, Cheolju Lee (2012) Expression profiling of more than 3500 proteins of MSS-type colorectal cancer by stable isotope labeling and mass spectrometry. J. Proteomics 75 (10): 3050-3062.
72Hye-Jung Kim, Un-Beom Kang, Hanna Lee, Ji-Han Jung, Seung-Taek Lee, Myeong-Hee Yu, Hoguen Kim, Cheolju Lee (2012) Profiling of differentially expressed proteins in stage IV colorectal cancers with good and poor outcomes. J. Proteomics 75 (10): 2983-2997.
71Kook-Han Kim, Hyung Jun Ahn, Won-Kyu Lee, Cheolju Lee, Myeong-Hee Yu, Eunice EunKyeong Kim (2012) Novel beta-structure of YLR301w from Saccharomyces cerevisiae. Acta Crystallogr. D Biol. Crystallogr. 68 (Pt 5): 531-540.
70Mohammad Humayun Kabir, Eui Jin Suh, Cheolju Lee (2012) Comparative phosphoproteome analysis reveals more ERK activation in MDA-MB-231 than in MCF-7. Int. J. Mass Spec. 309 (1): 1-12.
69Won Suk Yang, Hyeong-Gon Moon, Hee Sung Kim, Eui-Ju Choi, Myeong-Hee Yu, Dong-Young Noh, Cheolju Lee (2012) Proteomic Approach Reveals FKBP4 and S100A9 as Potential Prediction Markers of Therapeutic Response to Neoadjuvant Chemotherapy in Patients with Breast Cancer. J. Proteome Res. 11 (2): 1078-1088.
68Eui Jin Suh, Mohammad Humayun Kabir, Un Beom Kang, Jong Won Lee, Jonghan Yu, Dong Young Noh, Cheolju Lee (2012) Comparative profiling of plasma proteome from breast cancer patients reveals thrombospondin-1 and BRWD3 as serological biomarkers. Exp. Mol. Med. 44 (1): 36-44.
67Ji-Han Jung, Hye-Jung Kim, Jeonghun Yeom, Changyoung Yoo, Jihye Shin, Jinyoung Yoo, Chang Suk Kang, Cheolju Lee (2012) Lowered expression of galectin-2 is associated with lymph node metastasis in gastric cancer. J. Gastroenterol. 47 (1): 37-48.
66Binh V Le, Hun Kim, Jongkeun Choi, Jin-Hahn Kim, Myong-Joon Hahn, Cheolju Lee, Kyeong Kyu Kim, Hye-Yeon Hwang (2011) Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor. J. Mol. Biol. 414 (2): 231-242.
65Joo Young Yoon, Jeonghun Yeom, Heebum Lee, Kyutae Kim, Seungjin Na, Kunsoo Park, Eunok Paek, Cheolju Lee (2011) High-throughput peptide quantification using mTRAQ reagent triplex. BMC Bioinformatics 12 (Suppl 1): S46.
64Ho-Youl Lee, Taekyong Lee, Naery Lee, Eun G. Yang, Cheolju Lee, Jonghyun Lee, Eun-Yi Moon, Joohun Ha, Hyunsung Park (2011) Src activates HIF-1alpha not through direct phosphorylation of HIF-1alpha specific prolyl-4 hydroxylase 2 but through activation of the NADPH oxidase/Rac pathway. Carcinogenesis 32 (5): 703-712.
63Hye-Min Hong, Eun Joo Song, Eulsik Oh, Mohammad Humayun Kabir, Cheolju Lee, Young Sook Yoo (2011) Endothelin-1- and isoproterenol-induced differential protein expression and signaling pathway in HL-1 cardiomyocytes. Proteomics 11 (2): 283-297.
62Dong-Joo You, You Lim Kim, Cho Rong Park, Dong-Kyu Kim, Jeonghun Yeom, Cheolju Lee, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2010) Regulation of IkappaB kinase by GbetaL through recruitment of the protein phosphatases. Molecules and Cells 30 (6): 527-532.
61Joohee Mun, Yong-Hak Kim, Jonghan Yu, Jinhee Bae, Dong-Young Noh, Myeong-Hee Yu, Cheolju Lee (2010) A proteomic approach based on multiple parallel separation for the unambiguous identification of an antibody cognate antigen. Electrophoresis 31 (20): 3428-3436.
60Jinhee Bae, Eui Jin Suh, Cheolju Lee (2010) Interaction of T-type calcium channel Ca(V)3.3 with the beta-subunit. Molecules and Cells 30 (3): 185-191.
59Jeong-Eun Kim, Dong-Joo You, Cheolju Lee, Curie Ahn, Jae Young Seong, Jong-Ik Hwang (2010) Suppression of NF-kappaB signaling by KEAP1 regulation of IKKbeta activity through autophagic degradation and inhibition of phosphorylation. Cell. Signal. 22 (11): 1645-1654.
58Hanna Lee, Nara Shin, Meiying Song, Un-Beom Kang, Jeonghun Yeom, Cheolju Lee, Yeong Hee Ahn, Jong Shin Yoo, Young-Ki Paik, Hoguen Kim (2010) Analysis of nuclear high mobility group box 1 (HMGB1)-binding proteins in colon cancer cells: clustering with proteins involved in secretion and extranuclear function. J. Proteome Res. 9 (9): 4661-4670.
57Sang Bae Lee, Il-Sun Kwon, Jihye Park, Kyung-Hoon Lee, Younghee Ahn, Cheolju Lee, Joon Kim, Soo Young Choi, Sung-Woo Cho, Jee-Yin Ahn (2010) Ribosomal protein S3, a new substrate of Akt, serves as a signal mediator between neuronal apoptosis and DNA repair. J. Biol. Chem. 285 (38): 29457-29468.
56Sandra Orchard, Andrew Jones, Juan-Pablo Albar, Sang Yun Cho, Kyung-Hoon Kwon, Cheolju Lee, Henning Hermjakob (2010) Tackling quantitation: a report on the annual Spring Workshop of the HUPO-PSI 28-30 March 2010, Seoul, South Korea. Proteomics 10 (17): 3062-3066.
55Un-Beom Kang, Jeonghun Yeom, Hoguen Kim, Cheolju Lee (2010) Quantitative analysis of mTRAQ-labeled proteome using full MS scans. J. Proteome Res. 9 (7): 3750-3758.
54Un-Beom Kang, Younghee Ahn, Jong Won Lee, Yong-Hak Kim, Joon Kim, Myeong-Hee Yu, Dong-Young Noh, Cheolju Lee (2010) Differential profiling of breast cancer plasma proteome by isotope-coded affinity tagging method reveals biotinidase as a breast cancer biomarker. BMC Cancer 10: 114.
53Joo Young Yoon, Kyung Young Lim, Sunho Lee, Kunsoo Park*, Eunok Paek*, Un-Beom Kang, Jeonghun Yeom, Cheolju Lee (2010) Improved quantitative analysis of mass spectrometry using quadratic equations. J. Proteome Res. 9 (5): 2775-2785. (* Corresponding authors)
52Nithyananda Thorenoor, Jin-Hee Lee, Seong-Ki Lee, Sung-Won Cho, Yong-Hak Kim, Key-Sun Kim, Cheolju Lee (2010) Localization of the death effector domain of fas-associated death domain protein into the membrane of Escherichia coli induces reactive oxygen species-involved cell death. Biochemistry 49 (7): 1435-1447.
51Younghee Ahn, Un-Beom Kang, Joon Kim, Cheolju Lee (2010) Mining of serum glycoproteins by an indirect approach using cell line secretome. Molecules and Cells 29 (2): 123-130.
50Jong Wha J. Joo, Seungjin Na, Je-Hyun Baek, Cheolju Lee, Eunok Paek (2010) Target-Decoy with Mass Binning: a simple and effective validation method for shotgun proteomics using high resolution mass spectrometry. J. Proteome Res. 9 (2): 1150-1156.
49Yong-Hak Kim, Cheolju Lee, Hayoung Go, Kyoko Konishi, Kangseok Lee, Peter C. K. Lau, Myeong-Hee Yu (2010) Decolorization of malachite green by cytochrome c in the mitochondria of the fungus Cunninghamella elegans. Arch. Biochem. Biophys. 494 (2): 159-165.
48강운범, 김혜정, 서의진 (2009) 단백질 수식화 (Post-translational modification). 화학세계 49 (10): 63-67. (모든 저자는 연구실 구성원임)
47이철주, 염정훈 (2009) 질량분석기를 이용한 단백질체의 정량분석. 화학세계 49 (10): 58-62.
46유명희, 이철주 (2009) 단백질체학과 질량분석. 화학세계 49 (10): 57.
45Chae Young Hwang, Cheolju Lee, Ki-Sun Kwon (2009) Extracellular signal-regulated kinase 2-dependent phosphorylation induces cytoplasmic localization and degradation of p21Cip1. Mol. Cell. Biol. 29 (12): 3379-3389.
44Ki Joon Cho, Hye Jeong Shin, Ji-Hye Lee, Kyung-Jin Kim, Sarah S. Park, Youngmi Lee, Cheolju Lee, Sung Soo Park, Kyung Hyun Kim (2009) The crystal structure of ferritin from Helicobacter pylori reveals unusual conformational changes for iron uptake. J. Mol. Biol. 390 (1): 83-98.
43Jae Kyo Yi, Jong Wook Chang, Wonshik Han, Jong Won Lee, Eunyoung Ko, Dong Hyun Kim, Ji-Yeon Bae, Jonghan Yu, Cheolju Lee, Myeong-Hee Yu, Dong-Young Noh (2009) Autoantibody to Tumor Antigen, Alpha 2-HS Glycoprotein: A Novel Biomarker of Breast Cancer Screening and Diagnosis. Cancer Epidemiol. Biomarkers Prev. 18 (5): 1357-1364.
42Nithyananda Thorenoor, Yong-Hak Kim, Cheolju Lee, Myeong-Hee Yu, Karl-Heinrich Engesser (2009) A previously uncultured, paper mill Propionibacterium is able to degrade O-aryl alkyl ethers and various aromatic hydrocarbons. Chemosphere 75 (10): 1287-1293.
41Je-Hyun Baek, Won Suk Yang, Cheolju Lee, Myeong-Hee Yu (2009) Functional unfolding of alpha1-antitrypsin probed by hydrogen-deuterium exchange coupled with mass spectrometry. Mol. Cell. Proteomics 8 (5): 1072-1081.
40Hye-Jung Kim, Hyun Ju Kang, Hanna Lee, Seung-Taek Lee, Myeong-Hee Yu, Hoguen Kim, Cheolju Lee (2009) Identification of S100A8 and S100A9 as serological markers for colorectal cancer. J. Proteome Res. 8 (3): 1368-1379.
39Dong-Ki Kim, Ji Sook Yang, Kaushik Maiti, Jong-Ik Hwang, Kyungjin Kim, Dongseung Seen, Younghee Ahn, Cheolju Lee, Byeong-Cheol Kang, Hyuk Bang Kwon, Jun Cheon, Jae Young Seong (2009) A gonadotropin-releasing hormone-II antagonist induces autophagy of prostate cancer cells. Cancer Res. 69 (3): 923-931.
38Dong-Hyun Kim, Jinhee Bae, Jong Won Lee, Seon-Young Kim, Yong-Hak Kim, Ji-Yeon Bae, Jae Kyo Yi, Myeong-Hee Yu, Dong-Young Noh, Cheolju Lee (2009) Proteomic analysis of breast cancer tissue reveals upregulation of actin-remodeling proteins and its relevance to cancer invasiveness. Proteomics Clin. Appl. 3 (1): 30-40.
37Hye-Jung Kim, Myeong-Hee Yu, Hoguen Kim, Jonghoe Byun, Cheolju Lee (2008) Noninvasive molecular biomarkers for the detection of colorectal cancer. BMB Rep. 41 (10): 685-692.
36Won-Kyu Lee, Sang-Yeop Lee, Woo-Il Kim, Yoon-Hwa Rho, Young-Seuk Bae, Cheolju Lee, Ick Young Kim, Yeon Gyu Yu (2008) Characterization of the InsP6-dependent interaction between CK2 and Nopp140. Biochem. Biophys. Res. Commun. 376 (2): 439-444.
35Younghee Ahn, Chae-Young Hwang, Seung-Rock Lee, Ki-Sun Kwon, Cheolju Lee (2008) Tumor suppressor PTEN mediates a negative regulation of E3 ubiquitin-protein ligase Nedd4. Biochem. J. 412 (2): 331-338.
34Myung-Jeom Ryu, Vadim Anikin, Seok-Ho Hong, Heysung Jeon, Yeon Gyu Yu, Myeong-Hee Yu, Sergey Chernysh, Cheolju Lee (2008) Activation of NF-kB by alloferon through down-regulation of antioxidant proteins and IkBa. Mol. Cell. Biochem. 313 (1-2): 91-102.
33F. A. Pasha, M. Muddassar, Cheolju Lee, Seung Joo Cho (2008) Mechanism based QSAR studies of N-phenylbenzamides as antimicrobial agents. Environ. Toxicol. Pharmacol. 26: 128-135.
32이철주 (2008) 바이오마커 연구개발 동향. BMB News 28 (2): 57-63.
31F. A. Pasha, M. Muddassar, Hwanwon Jung, Beom-Seok Yang, Cheolju Lee, Jung Soo Oh, Seung Joo Cho, Hoon Cho (2008) QM and Pharmacophore based 3D-QSAR of MK886 Analogues against mPGES-1. Bull. Korean Chem. Soc. 29 (3): 647-655.
30Byunghee Shin, Hee-Jung Jung, Seok-Won Hyung, Hokeun Kim, Dongkyu Lee, Cheolju Lee, Myeong-Hee Yu, Sang-Won Lee (2008) Post-experiment monoisotopic mass filtering and refinement (PE-MMR) of tandem mass spectrometric data increases accuracy of peptide identification in LC/MS/MS. Mol. Cell. Proteomics 7 (6): 1124-1134.
29Seungjin Na, Eunok Paek*, Cheolju Lee (2008) CIFTER: Automated Charge-State Determination for Peptide Tandem Mass Spectra. Anal. Chem. 80 (5): 1520-1528. (*Corresponding author)
28Jong Wook Chang, Un-Beom Kang, Dong Hyun Kim, Jae Kyo Yi, Jong Won Lee, Dong-Young Noh, Cheolju Lee*, Myeong-Hee Yu* (2008) Identification of circulating endorepellin LG3 fragment: Potential use as a serological biomarker for breast cancer. Proteomics Clin. Appl. 2 (1): 23-32. (*Co-correspondence)
27Jae Yoon Chung, F. A. Pasha, Hwanwon Chung, Beom-Seok Yang, Cheolju Lee, Jung Soo Oh, Myoung-Won Moon, Seung Joo Cho, Art E. Cho (2008) Topomer-CoMFA Study of Tricyclic Azepine Derivatives - EGFR Inhibitors. Mol. Cell. Toxicol. 4 (1): 78-84.
26Myung-Jeom Ryu, Cheolju Lee*, Joon Kim, Hee-Sup Shin, Myeong-Hee Yu* (2008) Proteomic analysis of stargazer mutant mouse neuronal proteins involved in absence seizure. J. Neurochem. 104 (5): 1260-1270. (* Co-correspondence)
25Woo-Sung Ahn, Ji-Young Ahn, Chan-Hun Jung, Kwang Yeon Hwang, Eunice Eunkyeong Kim, Joon Kim, Hana Im, Jin-Oh Kim, Myeong-Hee Yu, Cheolju Lee (2007) Optimization of expression conditions for soluble protein by using a robotic system of multi-culture vessels. J. Microbiol. Biotechnol. 17 (11): 1868-1874.
24Taeoh Kim, Sang Jin Kim, Kyunggon Kim, Un-Beom Kang, Cheolju Lee, Kyong Soo Park, Hyeong Gon Yu, Youngsoo Kim (2007) Profiling of vitreous proteomes from proliferative diabetic retinopathy and nondiabetic patients. Proteomics 7 (22): 4203-4215.
23Krishna Moorthy Vukoti, Won-Kyu Lee, Ho-Jun Kim, Ick Young Kim, Eun Gyeong Yang, Cheolju Lee, Yeon Gyu Yu (2007) Molecular dissection of the interaction between hBLT2 and the G protein alpha subunits. Bull. Korean Chem. Soc. 28 (6): 1005-1009.
22Myung-Jeom Ryu, Daesoo Kim, Un-Beom Kang, Joon Kim, Hee-Sup Shin, Cheolju Lee*, Myeong-Hee Yu* (2007) Proteomic analysis of g-butyrolactone-treated mouse thalamus reveals dysregulated proteins upon absence seizure. J. Neurochem. 102 (3): 646-656. (* Co-correspondence)
21Won-Kyu Lee, Hye-Jung Kim, Hye-Ki Min, Un-Beom Kang, Cheolju Lee, Sangwon Lee, Ick Young Kim, Seung Taek Lee, Oh-Seung Kwon, Yeon Gyu Yu (2007) A comprehensive identification of synaptic vesicle proteins in rat brains by cRPLC/MS-MS and 2-DE/MALDI-TOF-MS. Bull. Korean Chem. Soc. 28 (9): 1499-1509.
20Je-Hyun Baek, Hana Im, Un-Beom Kang, Ki Moon Seong, Cheolju Lee, Joon Kim, Myeong-Hee Yu (2007) Probing the local conformational change of a1-antitrypsin. Protein Sci. 16 (9): 1842-1850.
19Yong-Hak Kim*, Un-Beom Kang, Kyoko Konishi, Cheolju Lee* (2006) Rhodococcus sp. strain TM1 plays a synergistic role in the degradation of piperidine by Mycobacterium sp. strain THO100. Arch Microbiol 186 (3): 183-193. (* Co-correspondence)
18Hyunki Kim, Hyun Ju Kang, Kwon Tae You, Se Hoon Kim, Kang Young Lee, Tae Il Kim, Chul Kim, Si Young Song, Hye-Jung Kim, Cheolju Lee, Hoguen Kim (2006) Suppression of human selenium-binding protein 1 is a late event in colorectal carcinogenesis and is associated with poor survival. Proteomics 6 (11): 3466-3476.
17Eun A. Kim, Yoon Tae Noh, Myung-Jeom Ryu, Hyun-Taek Kim, Sung-Eun Lee, Cheol-Hee Kim, Cheolju Lee, Young Ho Kim, Cheol Yong Choi (2006) Phosphorylation and transactivation of Pax6 by homeodomain-interacting protein kinase 2. J. Biol. Chem. 281 (11): 7489-7497.
16Jong-Shik Shin, Seung-Hyun Ryu, Cheolju Lee*, Myeong-Hee Yu* (2006) Misfolding-assisted selection of stable protein variants using phage displays. J. Biochem. Mol. Biol. 39 (1): 55-60. (* Co-correspondence)
15Ali Ashek, Cheolju Lee, Hyunsung Park, Seung Joo Cho (2006) 3D QSAR studies of dioxins and dioxin-like compounds using CoMFA and CoMSIA. Chemosphere 65 (3): 521-529.
14이철주 (2005) ATP-의존성 단백질분해효소의 기질단백질 분해 메커니즘. Biochem. Mol. Biol. News 25 (3): 222-228.
13Cheolju Lee*, Myeong-Hee Yu (2005) Protein folding and diseases. J. Biochem. Mol. Biol. 38 (3): 275-280. (* Corresponding author)
12Taeko Nishiwaki, Yoshinori Satomi, Masato Nakajima, Cheolju Lee, Reiko Kiyohara, Hakuto Kageyama, Yohko Kitayama, Mioko Temamoto, Akihiro Yamaguchi, Atsushi Hijikata, Mitiko Go, Hideo Iwasaki, Toshifumi Takao, Takao Kondo (2004) Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942. Proc. Natl. Acad. Sci. USA 101 (38): 13927-13932.
11Un-Beom Kang, Je-Hyun Baek, Seung-Hyun Ryu, Joon Kim, Myeong-Hee Yu, Cheolju Lee (2004) Kinetic mechanism of protease inhibition by a1-antitrypsin. Biochem. Biophys. Res. Commun. 323 (2): 409-415.
KIST에 오기 전 - 생명공학연구원, Northwestern University, 서울대학교
10Cheolju Lee, Soon Mi Lee, Partha Mukhopadhyay, Seung Jun Kim, Sang Chul Lee, Woo-Sung Ahn, Myeong-Hee Yu, Gisela Storz, Seong Eon Ryu (2004) Redox regulation of OxyR requires specific disulfide bond formation involving a rapid kinetic reaction path. Nat. Struct. Mol. Biol. 11 (12): 1179-1185.
9Cheolju Lee*, Seung Jun Kim*, Dae Gwin Jeong, Soon Mi Lee, Seong Eon Ryu (2003) Structure of human FIH-1 reveals a unique active site pocket and interaction sites for HIF-1 and von Hippel-Lindau. J. Biol. Chem. 278 (9): 7558-7563. (* Equal contribution)
8Eun Joo Seo, Cheolju Lee, Myeong-Hee Yu (2002) Concerted regulation of inhibitory activity of alpha 1-antitrypsin by the native strain distributed throughout the molecule. J. Biol. Chem. 277 (16): 14216-14220.
7Cheolju Lee, Sumit Prakash, Andreas Matouschek (2002) Concurrent translocation of multiple polypeptide chains through the proteasomal degradation channel. J. Biol. Chem. 277 (38): 34760-34765.
6Moon B. Yim, Hyung-Soon Yim, Cheolju Lee, Sa-Ouk Kang, P. Boon Chock (2001) Protein glycation: creation of catalytic sites for free radical generation. Ann. NY Acad. Sci. 928: 48-53.
5Cheolju Lee*, Michael P. Schwartz*, Sumit Prakash, Masahiro Iwakura, Andreas Matouschek (2001) ATP-dependent proteases degrade their substrates by processively unraveling them from the degradation signal. Molecular Cell 7 (3): 627-637. (*Equal contribution)
4Cheolju Lee, Eun Joo Seo, Myeong-Hee Yu (2001) Role of the connectivity of secondary structure segments in the folding of a1-antitrypsin. Biochem. Biophys. Res. Commun. 287 (3): 636-641.
3Cheolju Lee, Jin-Soo Maeng, Jean-Pierre Kocher, Byungkook Lee, Myeong-Hee Yu (2001) Cavities of a1-antitrypsin that play structural and functional roles. Protein Sci. 10 (7): 1446-1453.
2Cheolju Lee, Soon-Ho Park, Min-Youn Lee, Myeong-Hee Yu (2000) Regulation of protein function by native metastability. Proc. Natl. Acad. Sci. USA 97 (14): 7727-7731.
1Cheolju Lee, Moon B. Yim, P. Boon Chock, Hyung-Soon Yim, Sa-Ouk Kang (1998) Oxidation-reduction properties of methylglyoxal-modified protein in relation to free radical generation. J. Biol. Chem. 273 (39): 25272-25278.
Conference Proceedings
2Cheolju Lee. Deciphering phospho-signals using less than 100 cells in isobaric labeling phosphoproteome analysis. Presented at: The 28th International KOGO Annual Conference - Session14. Multi-omics in medicine (Single cell proteomics). September 4-6, 2019. Sejong Convention Center, Sejong University, Seoul, Korea.
1Shinyeong Ju, Yumi Kwon, Jeong-Mok Kim, Daechan Park, Seonjeong Lee, Un-Beom Kang, Jin-Won Lee, Cheol-Sang Hwang, Cheolju Lee. iNrich, a rapid and robust method to enrich N-terminal proteome in a highly multiplexable platform. Presented at: KHUPO 19th Annual International Proteomics Conference (우수포스터상 수상, 구두발표). March 28-29, 2019. Global Education Center for Engineers, Seoul National University, Seoul, Korea.
1Yumi Kwon, Shinyeong Ju, Prashant Kaushal, Jin-Won Lee, Cheolju Lee. Drying TMT-labeled samples in presence of NHS-quenching reagent is detrimental on phosphopeptide. Presented at: 2018 KHUPO 하계 학술대회 (Proteomics Year's author, 구두발표). 2018년 7월 5 일 (목) - 7일 (토). KIST 강릉분원 과학기술연수원.
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